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Bresnahan, PJ, Martz TR, Takeshita Y, Johnson KS, LaShomb M.  2014.  Best practices for autonomous measurement of seawater pH with the Honeywell Durafet. Methods in Oceanography.   10.1016/j.mio.2014.08.003  
Bresnahan, PJ, Wirth T, Martz TR, Andersson AJ, Cyronak T, D’Angelo S, Pennise J, Melville KW, Lenain L, Statom N.  2016.  A sensor package for mapping pH and oxygen from mobile platforms. Methods in Oceanography. 17:1-13.   AbstractWebsite

A novel chemical sensor package named “WavepHOx” was developed in order to facilitate measurement of surface ocean pH, dissolved oxygen, and temperature from mobile platforms. The system comprises a Honeywell Durafet pH sensor, Aanderaa optode oxygen sensor, and chloride ion selective electrode, packaged into a hydrodynamic, lightweight housing. The WavepHOx has been deployed on a stand-up paddleboard and a Liquid Robotics Wave Glider in multiple near-shore settings in the Southern California Bight. Integration of the WavepHOx into these mobile platforms has enabled high spatiotemporal resolution pH and dissolved oxygen data collection. It is a particularly valuable tool for mapping shallow, fragile, or densely vegetated ecosystems which cannot be easily accessed by other platforms. Results from three surveys in San Diego, California, are reported. We show pH and dissolved oxygen variability >0.3 and >50% saturation, respectively, over tens to hundreds of meters to highlight the degree of natural spatial variability in these vegetated ecosystems. When deployed during an extensive discrete sampling program, the WavepHOx pH had a root mean squared error of 0.028 relative to pH calculated from fifty six measurements of total alkalinity and dissolved inorganic carbon, confirming its capacity for accurate, high spatiotemporal resolution data collection.

Bresnahan, PJ, Martz TR.  2018.  Gas diffusion cell geometry for a microfluidic dissolved inorganic carbon analyzer. Ieee Sensors Journal. 18:2211-2217.   10.1109/jsen.2018.2794882   AbstractWebsite

Variable gas diffusion cell geometries were tested for the extraction of dissolved inorganic carbon (DIC) from a microfluidic (tens to hundreds of microliters) seawater sample. With a focus on optimization of diffusion cell geometry, we compare five unique diffusion cell designs. Using 3-D printing technology to streamline the prototyping and testing process, we were able to conceive, design, fabricate, and thoroughly evaluate each design over the course of about one month. In total, 1043 DIC measurements were carried out in 109 experiments for the five working manifolds. We find that a small diameter, cylindrical diffusion cell design offers several advantages over its planar counterparts and a larger diameter cylindrical cell, most notably the ability to increase the ratio of the exchange membrane's contact surface area to solution volume (the "aspect ratio") without sacrificing channel integrity. Multiple designs approached short-term repeatability of <1%, but only the cylindrical diffusion cell design allowed for <0.2% repeatability using less than 200 mu L of sample.

Briggs, EM, Sandoval S, Erten A, Takeshita Y, Kummel AC, Martz TR.  2017.  Solid State Sensor for Simultaneous Measurement of Total Alkalinity and pH of Seawater. Acs Sensors. 2:1302-1309.   10.1021/acssensors.7b00305   AbstractWebsite

A novel design is demonstrated for a solid state, reagent-less sensor capable of rapid and simultaneous measurement of pH and Total Alkalinity (A(T)) using ion sensitive field effect transistor (ISFET) technology to provide a simplified means of characterization of the aqueous carbon dioxide system through measurement of two "master variables": pH and A(T). ISFET-based pH sensors that achieve 0.001 precision are widely used in various oceanographic applications. A modified ISFET is demonstrated to perform a nanoliter-scale acid base titration of A(T) in under 40 s. This method of measuring A(T), a Coulometric Diffusion Titration, involves electrolytic generation of titrant, through the electrolysis of water on the surface of the chip via a microfabricated electrode eliminating the requirement of external reagents. Characterization has been performed in seawater as well as titrating individual components (i.e., OH-, HCO3-, B(OH)(4)(-), PO43-) of seawater A(T). The seawater measurements are consistent with the design in reaching the benchmark goal of 0.5% precision in A(T) over the range of seawater A(T) of similar to 2200-2500 mu mol kg(-1) which demonstrates great potential for autonomous sensing.

Byrne, RH, DeGrandpre MD, Short T, Martz TR, Merlivat L, McNeil C, Sayles F, Bell R, Fietzek P.  2010.  Sensors and Systems for Observations of Marine CO2 System Variables. Proceedings of OceanObs’09: Sustained Ocean Observations and Information for Society . 2( Hall J, Harrison DE, Stammer D, Eds.)., Venice, Italy: ESA Publication WPP-306   10.5270/OceanObs09.cwp.13   Abstract
DeGrandpre, MD, Martz TR, Hart RD, Elison DM, Zhang A, Bahnson AG.  2011.  Universal Tracer Monitored Titrations. Analytical Chemistry. 83:9217-9220.   10.1021/ac2025656   AbstractWebsite

Titrations, while primarily known as the chemical rite of passage for fledgling science students, are still widely used for chemical analysis. With its many years of existence and improvement, the method would seem an unlikely candidate for innovation, yet it is desirable, in this age of autonomous sensing where analyzers may be sent into space or to the bottom of the ocean, to have a simplified titrimetric method that does not rely upon volumetric or gravimetric measurement of sample and titrant. In previous work on the measurement of seawater alkalinity, we found that use of a tracer in the titrant eliminates the need to measure mass or volume. Here, we show the versatility of the method for diverse types of titrations and tracers. The results suggest that tracers may be employed in all types of titrations, opening the door for greatly simplified laboratory and field-based chemical analysis.

Du, N, Gholami P, Kline DI, Dupont CL, Dickson AG, Mendola D, Martz T, Allen AE, Mitchell BG.  2018.  Simultaneous quantum yield measurements of carbon uptake and oxygen evolution in microalgal cultures. Plos One. 13   10.1371/journal.pone.0199125   AbstractWebsite

The photosynthetic quantum yield (F), defined as carbon fixed or oxygen evolved per unit of light absorbed, is a fundamental but rarely determined biophysical parameter. A method to estimate Phi for both net carbon uptake and net oxygen evolution simultaneously can provide important insights into energy and mass fluxes. Here we present details for a novel system that allows quantification of carbon fluxes using pH oscillation and simultaneous oxygen fluxes by integration with a membrane inlet mass spectrometer. The pHOS system was validated using Phaeodactylum tricornutum cultured with continuous illumination of 110 mu mole quanta m(-2) s(-1) at 25 degrees C. Furthermore, simultaneous measurements of carbon and oxygen flux using the pHOS-MIMS and photon flux based on spectral absorption were carried out to explore the kinetics of F in P. tricornutum during its acclimation from low to high light (110 to 750 mu mole quanta m(-2) s(-1)). Comparing results at 0 and 24 hours, we observed strong decreases in cellular chlorophyll a (0.58 to 0.21 pg cell(-1)), Fv/Fm (0.71 to 0.59) and maximum Phi(CO2) (0.019 to 0.004) and Phi(O2) (0.028 to 0.007), confirming the transition toward high light acclimation. The Phi time-series indicated a non-synchronized acclimation response between carbon uptake and oxygen evolution, which has been previously inferred based on transcriptomic changes for a similar experimental design with the same diatom that lacked physiological data. The integrated pHOS-MIMS system can provide simultaneous carbon and oxygen measurements accurately, and at the time-resolution required to resolve highresolution carbon and oxygen physiological dynamics.

Frieder, CA, Nam SH, Martz TR, Levin LA.  2012.  High temporal and spatial variability of dissolved oxygen and pH in a nearshore California kelp forest. Biogeosciences. 9:4099-4132.   10.5194/bg-9-3917-2012  
Gonski, SF, Cai WJ, Ullman WJ, Joesoef A, Main CR, Pettay DT, Martz TR.  2018.  Assessment of the suitability of Durafet-based sensors for pH measurement in dynamic estuarine environments. Estuarine Coastal and Shelf Science. 200:152-168.   10.1016/j.ecss.2017.10.020   AbstractWebsite

The suitability of the Honeywell Durafet to the measurement of pH in productive, high-fouling, and highly-turbid estuarine environments was investigated at the confluence of the Murderkill Estuary and Delaware Bay (Delaware, USA). Three different flow configurations of the SeapHOx sensor equipped with a Honeywell Durafet and its integrated internal (Ag/AgCl reference electrode containing a 4.5 M KCl gel liquid junction) and external (solid-state chloride ion selective electrode, CI-ISE) reference electrodes were deployed for four periods between April 2015 and September 2016. In this environment, the Honeywell Durafet proved capable of making high-resolution and high-frequency pH measurements on the total scale between pH 6.8 and 8.4. Natural pH fluctuations of >1 pH unit were routinely captured over a range of timescales. The sensor pH collected between May and August 2016 using the most refined SeapHOx configuration exhibited good agreement with multiple sets of independently measured reference pH values. When deployed in conjunction with rigorous discrete sampling and calibration schemes, the sensor pH had a root-mean squared error ranging between 0.011 and 0.036 pH units across a wide range of salinity relative to both pH(T) calculated from measured dissolved inorganic carbon and total alkalinity and pH(NBs) measured with a glass electrode corrected to pH(T) at in situ conditions. The present work demonstrates the viability of the Honeywell Durafet to the measurement of pH to within the weather-level precision defined by the Global Ocean Acidification Observing Network (GOA-ON, <= 0.02 pH units) as a part of future estuarine CO2 chemistry studies undertaken in dynamic environments. (C) 2017 Elsevier Ltd. All rights reserved.

Gray, SEC, DeGrandpre MD, Moore TS, Martz TR, Friederich GE, Johnson KS.  2011.  Applications of in situ pH measurements for inorganic carbon calculations. Marine Chemistry. 125:82-90.   10.1016/j.marchem.2011.02.005   AbstractWebsite

This study examines the utility of combining pH measurements with other inorganic carbon parameters for autonomous mooring-based carbon cycle research. Determination of the full suite of inorganic carbon species in the oceans has previously been restricted to ship-based studies. Now with the availability of autonomous sensors for pH and the partial pressure of CO(2) (pCO(2)), it is possible to characterize the inorganic carbon system on moorings and other unmanned platforms. The indicator-based pH instrument, SAMI-pH, was deployed with an autonomous equilibrator-infrared pCO(2) system in Monterey Bay. California USA from June to August 2007. The two-month time-series show a high degree of short-term variability, with pH and pCO(2) changing by as much as 0.32 pH units and 240 mu atm, respectively, during upwelling periods. The pH and salinity-derived alkalinity (A(Tsalin)) were used to calculate the other inorganic carbon parameters, including pCO(2), total dissolved inorganic carbon (DIC) and CaCO(3) saturation states. The calculated pCO(2) was within 2 mu atm of the measured pCO(2) during the first day of the deployment and within 8 mu atm over the first month. The DIC calculated from pH-A-Ban and pCO(2)-A(Tsalin) were within 5 mu mol kg(-1) of each other during the first month. However, DIC calculated from pH-pCO(2) differed by similar to 50 mu mol kg(-1) from the other estimates over the same period, reflecting the sensitivity of the pH-pCO(2) calculation to measurement error. The data continued to diverge during the final month and this difference was likely driven by extensive biofouling. Because of the relative insensitivity of CO(3)(2-) concentration to these errors, aragonite saturation calculated from the pH-pCO(2) pair was within 0.15 of the pH-A(Tsalin) values over the entire deployment. These results show that in situ pH, when combined with other CO(2) parameters, can provide valuable insights into both data quality and inorganic carbon cycling. (C) 2011 Elsevier B.V. All rights reserved.

Hofmann, GE, Smith JE, Johnson KS, Send U, Levin LA, Micheli F, Paytan A, Price NN, Peterson B, Takeshita Y, Matson PG, Crook ED, Kroeker KJ, Gambi MC, Rivest EB, Frieder CA, Yu PC, Martz TR.  2011.  High-Frequency Dynamics of Ocean pH: A Multi-Ecosystem Comparison. Plos One. 6   10.1371/journal.pone.0028983   AbstractWebsite

The effect of Ocean Acidification (OA) on marine biota is quasi-predictable at best. While perturbation studies, in the form of incubations under elevated pCO(2), reveal sensitivities and responses of individual species, one missing link in the OA story results from a chronic lack of pH data specific to a given species' natural habitat. Here, we present a compilation of continuous, high-resolution time series of upper ocean pH, collected using autonomous sensors, over a variety of ecosystems ranging from polar to tropical, open-ocean to coastal, kelp forest to coral reef. These observations reveal a continuum of month-long pH variability with standard deviations from 0.004 to 0.277 and ranges spanning 0.024 to 1.430 pH units. The nature of the observed variability was also highly site-dependent, with characteristic diel, semi-diurnal, and stochastic patterns of varying amplitudes. These biome-specific pH signatures disclose current levels of exposure to both high and low dissolved CO2, often demonstrating that resident organisms are already experiencing pH regimes that are not predicted until 2100. Our data provide a first step toward crystallizing the biophysical link between environmental history of pH exposure and physiological resilience of marine organisms to fluctuations in seawater CO2. Knowledge of this spatial and temporal variation in seawater chemistry allows us to improve the design of OA experiments: we can test organisms with a priori expectations of their tolerance guardrails, based on their natural range of exposure. Such hypothesis-testing will provide a deeper understanding of the effects of OA. Both intuitively simple to understand and powerfully informative, these and similar comparative time series can help guide management efforts to identify areas of marine habitat that can serve as refugia to acidification as well as areas that are particularly vulnerable to future ocean change.

Johnson, KS, Jannasch HW, Coletti LJ, Elrod VA, Martz TR, Takeshita Y, Carlson RJ, Connery JG.  2016.  Deep-Sea DuraFET: A Pressure Tolerant pH Sensor Designed for Global Sensor Networks. Analytical Chemistry. 88:3249-3256.   10.1021/acs.analchem.5b04653   AbstractWebsite

Increasing atmospheric carbon dioxide is driving a long-term decrease in ocean pH which is superimposed on daily to seasonal variability. These changes impact ecosystem processes, and they serve as a record of ecosystem metabolism. However, the temporal variability in pH is observed at only a few locations in the ocean because a ship is required to support pH observations of sufficient precision and accuracy. This paper describes a pressure tolerant Ion Sensitive Field Effect Transistor pH sensor that is based on the Honeywell Durafet ISFET die. When combined with a AgCl pseudoreference sensor that is immersed directly in seawater, the system is capable of operating for years at a time on platforms that cycle from depths of several km to the surface. The paper also describes the calibration scheme developed to allow calibrated pH measurements to be derived from the activity of HCl reported by the sensor system over the range of ocean pressure and temperature. Deployments on vertical profiling platforms enable self-calibration in deep waters where pH values are stable. Measurements with the sensor indicate that it is capable of reporting pH with an accuracy of 0.01 or better on the total proton scale and a precision over multiyear periods of 0.005. This system enables a global ocean observing system for ocean pH.

Kapsenberg, L, Kelley AL, Shaw EC, Martz TR, Hofmann GE.  2015.  Near-shore Antarctic pH variability has implications for the design of ocean acidification experiments. Scientific Reports. 5:9638.: The Author(s)   10.1038/srep09638   AbstractWebsite
Kroeker, KJ, Micheli F, Gambi MC, Martz TR.  2011.  Divergent ecosystem responses within a benthic marine community to ocean acidification. Proceedings of the National Academy of Sciences of the United States of America. 108:14515-14520.   10.1073/pnas.1107789108   AbstractWebsite

Ocean acidification is predicted to impact all areas of the oceans and affect a diversity of marine organisms. However, the diversity of responses among species prevents clear predictions about the impact of acidification at the ecosystem level. Here, we used shallow water CO(2) vents in the Mediterranean Sea as a model system to examine emergent ecosystem responses to ocean acidification in rocky reef communities. We assessed in situ benthic invertebrate communities in three distinct pH zones (ambient, low, and extreme low), which differed in both the mean and variability of seawater pH along a continuous gradient. We found fewer taxa, reduced taxonomic evenness, and lower biomass in the extreme low pH zones. However, the number of individuals did not differ among pH zones, suggesting that there is density compensation through population blooms of small acidification-tolerant taxa. Furthermore, the trophic structure of the invertebrate community shifted to fewer trophic groups and dominance by generalists in extreme low pH, suggesting that there may be a simplification of food webs with ocean acidification. Despite high variation in individual species' responses, our findings indicate that ocean acidification decreases the diversity, biomass, and trophic complexity of benthic marine communities. These results suggest that a loss of biodiversity and ecosystem function is expected under extreme acidification scenarios.

Martz, T, Takeshita Y, Rolph R, Bresnahan P.  2012.  Tracer Monitored Titrations: Measurement of Dissolved Oxygen. Analytical Chemistry. 84:290-296.   10.1021/ac202537f   AbstractWebsite

The tracer monitored titration (TMT) technique is evaluated for measurement of dissolved oxygen. The TMT developed in this work uses a simple apparatus consisting of a low-precision pump for titrant delivery and an optical detector based on a white LED and two photodiodes with interference filters. It is shown that the classic Winkler method can be made free of routine volumetric and gravimetric measurements by application of TMT theory, which allows tracking the amounts of titrant and sample using a chemical tracer. The measurement precision of the prototype setup was 0.3% RSD.

Martz, TR, DeGrandpre MD, Strutton PG, McGillis WR, Drennan WM.  2009.  Sea surface pCO(2) and carbon export during the Labrador Sea spring-summer bloom: An in situ mass balance approach. Journal of Geophysical Research-Oceans. 114   10.1029/2008jc005060   AbstractWebsite

We report depth-resolved in situ time series of the partial pressure of CO(2) (pCO(2)) and other carbon-related parameters spanning the development and decline of a high-latitude phytoplankton bloom. A suite of sensors was deployed on a mooring in the Labrador Sea from June to August 2004. The study became quasi-Lagrangian when the mooring broke free in late June. Measured parameters included pCO(2), chlorophyll a fluorescence, beam c, optical backscatter, and photosynthetically active radiation. During the bloom, the pCO(2) was drawn down from 330 to 260 mu atm, corresponding to a 70 mu mol kg(-1) decrease of dissolved inorganic carbon (DIC). One-dimensional model results suggest that the observed drawdown was primarily driven by local processes and contributions from horizontal advection were minimal. A mass balance using the DIC and particulate organic carbon found that 47 mmol C m(-2) d(-1) of DIC was assimilated into biomass. The bloom biomass was not remineralized in the mixed layer but was rapidly exported below 35 m within 15 days of the bloom. As a consequence, the large air-sea pCO(2) gradient persisted, and approximately 30% of the DIC was regained through air-sea exchange by the end of the study. It is likely that all of the exported organic matter, corresponding to 5.4 +/- 1.9 Tg of carbon, was replaced by atmospheric CO(2) prior to the onset of deep convective mixing.

Martz, TR, Carr JJ, French CR, DeGrandpre MD.  2003.  A submersible autonomous sensor for spectrophotometric pH measurements of natural waters. Analytical Chemistry. 75:1844-1850.   10.1021/ac020568l   AbstractWebsite

An autonomous sensor for long-term in situ measurements of the pH of natural waters is described. The system is based upon spectrophotometric measurements of a mixture of sample and sulfonephthalein indicator. A simple plumbing design, using a small, low-power solenoid pump and valve, avoids the need for quantitative addition of indicator. A similar to50-muL slug of indicator is pulled into the sample stream by the pump, and subsequent pumping and mixing results in a section of indicator and sample where absorbance measurements can be made. The design also permits direct determination of the indicator pH perturbation. Absorbances are recorded at three wavelengths (439, 579, and 735 nm) using a custom-built 1.7-cm path length fiber-optic flow cell. Solution blanks are obtained by periodically flushing the cell with sample. Field tests were performed in a local river over an 8-day period. The in situ accuracy, based on comparison with laboratory spectrophotometric pH measurements, was -0.003 pH unit (n = 16), similar to the measurement precision. No drift was observed during the 8-day period. The absorbance ratio used to calculate pH, in combination with a simple and robust optical design, imparts an inherent stability not achievable with conventional potentiometric methods, making the design feasible for long-term autonomous pH measurements.

Martz, TR, Jannasch HW, Johnson KS.  2009.  Determination of carbonate ion concentration and inner sphere carbonate ion pairs in seawater by ultraviolet spectrophotometric titration. Marine Chemistry. 115:145-154.   10.1016/j.marchem.2009.07.002   AbstractWebsite

We describe a novel method for determination of carbonate ion concentration in seawater by acidimetric titration with UV detection. Because CO(3)(2-) absorbs light at wavelengths of less than similar to 250 nm, it is feasible to titrate most carbonate-containing natural waters with acid and observe an increase in %Transmittance. The observed signal is proportional to the concentration of carbonate ion in the original sample. Present technology permits a theoretical precision in the determination of [CO(3)(2-)] in natural seawater background of similar to 0.5% (at 10 cm pathlength, 200 mu M CO(3)(2-), +/- 0.0001 AU). The procedure has been tested at 1 and 10 cm pathlengths using single and multipoint titration methods, respectively. Results using natural seawater test solutions indicate a resolution in [CO(3)(2-)] of 3.6% in a standard I cm cuvette using a very simple manual method, and 0.7% using a custom-built 10 cm closed titration cell. Estimates of the relative distribution of CO(3)(2-) between inner and outer sphere complexes with Mg(2+) and Na(+) were also determined and the equilibrium constants agree with published values. This method provides a new tool for studies of several fundamental aspects CO(2) chemistry, including the second dissociation constant of carbonic acid, CO(3)(2-) ion pairing, and can be used to directly measure the distribution of carbonate ion in seawater and many other types of natural waters. (C) 2009 Elsevier B.V. All rights reserved.

Martz, TR, Dickson AG, DeGrandpre MD.  2006.  Tracer monitored titrations: measurement of total alkalinity. Analytical Chemistry. 78:1817-1826.   10.1021/ac0516133   AbstractWebsite

We introduce a new titration methodology, tracer monitored titration (1741), in which analyses are free of volumetric and gravimetric measurements and insensitive to pump precision and reproducibility. Spectrophotometric monitoring of titrant dilution, rather than volume increment, lays the burden of analytical performance solely on the spectrophotometer. In the method described here, the titrant is a standardized mixture of acid-base indicator and strong acid. Dilution of a pulse of titrant in a titration vessel is tracked using the total indicator concentration measured spectrophotometrically. The concentrations of reacted and unreacted indicator species, derived from Beer's law, are used to calculate the relative proportions of titrant and sample in addition to the equilibrium position (pH) of the titration mixture. Because the method does not require volumetric or gravimetric additions of titrant, simple low-precision pumps can be used. Here, we demonstrate application of TMT for analysis of total alkalinity (AT). High-precision, high-accuracy seawater AT measurements are crucial for understanding, for example, the marine CaCO3 budget and saturation state, anthropogenic CO2 penetration into the oceans, calcareous phytoplankton blooms, and coral reef dynamics. We present data from 286 titrations on three types of total alkalinity standards: Na2CO3 in 0.7 mol kg(.)soln(-1) NaCl, NaOH in 0.7 mol kg(.)soln(-1) NaCl, and a seawater Certified Reference Material (CRM). Based on Na2CO3 standards, the accuracy and precision are +/- 0.2 and +/- 0.1% (4 and 2 mu mol kg-soln(-1) for A(T) similar to 2100-2500 mu mol kg(.)soln(-1), n = 242), using low-precision solenoid pumps to introduce sample and titrant. Similar accuracy and precision were found for analyses run 42 days after the initial experiments. Excellent performance is achieved by optimizing the spectrophotometric detection system and relying upon basic chemical thermodynamics for calculating the equivalence point. Although applied to acid-base titrations in this paper, the approach should be generally applicable to other types of titrations.

Martz, TR, Connery JG, Johnson KS.  2010.  Testing the Honeywell Durafet (R) for seawater pH applications. Limnology and Oceanography-Methods. 8:172-184.   10.4319/lom.2010.8.172   AbstractWebsite

We report on the first seawater tests at 1 atm of the Honeywell Durafet (R) pH sensor, a commercially available ion sensitive field effect transistor (ISFET). Performance of this sensor was evaluated in a number of different situations including a temperature-controlled calibration vessel, the MBARI test tank, shipboard underway mapping, and a surface mooring. Many of these tests included a secondary reference electrode in addition to the internal reference supplied with the stock Durafet sensor. We present a theoretical overview of sensor response using both types of reference electrode. The Durafet sensor operates with a short term precision of +/- 0.0005 pH over periods of several hours and exhibits stability of better than 0.005 pH over periods of weeks to months. Our tests indicate that the Durafet pH sensor operates at a level of performance satisfactory for many types of biogeochemical studies at low pressure.

Martz, TR, Daly KL, Byrne RH, Stillman JH, Turk D.  2015.  Technology for ocean acidification research: Needs and availability. Oceanography. 28:40-47.   10.5670/oceanog.2015.30   AbstractWebsite

Diverse instruments, both custom built and commercially available, have been used to measure the properties of the aqueous CO2 system in seawater at differing levels of autonomy (automated benchtop, continuous underway, autonomous in situ). In this I review, we compare the capabilities of commercially available instruments with the needs of oceanographers in order to highlight major shortfalls in the state-of-the art instrumentation broadly available to the ocean acidification (OA) scientific community. In addition, we describe community surveys that identify needs for continued development and refinement of sensor and instrument technologies, expansion of programs that provide Certified Reference Materials, development of best practices documentation for autonomous sensors, and continued and expanded sensor intercomparison experiments.

Martz, TR, Johnson KS, Riser SC.  2008.  Ocean metabolism observed with oxygen sensors on profiling floats in the South Pacific. Limnology and Oceanography. 53:2094-2111.   10.4319/lo.2008.53.5_part_2.2094   AbstractWebsite

We estimated rates of production and export in the South Pacific (80 degrees W to 180 degrees W in a zonal band between 35 degrees S and 50 degrees S) using 1.5 yr of oxygen measurements from profiling floats. Export production, calculated from oxygen utilization rates below the compensation depth from December to April, was 10.7 +/- 2 mmol C m(-2) d(-1) (n = 36, 95% CI). The corresponding satellite net primary production was 46 6 4 mmol C m(-2) d(-1), yielding a regional e-ratio of 0.23 +/- 0.05. Averaging oxygen utilization rates resulted in a net cancellation of most water mass changes related to advection and float migration. The composite vertical profile of remineralization rates, obtained by binning 36 rate profiles, agreed with published measurements based on oxygen utilization rates in hydrographic surveys and fits the classic form of a particulate organic carbon (POC) attenuation function. However, the disagreement between oxygen-based remineralization rates and those obtained by sediment traps suggests fundamental differences between these two methods. Using float data to constrain a one-dimensional mixed-layer model, the annual net community production at 45 degrees S, 144 degrees W was similar to 2.5 mol C m(-2) yr(-1). Spatial trends in export production coinciding with the New Zealand shelf and Subtropical Front are identified.

Martz, T, Send U, Ohman MD, Takeshita Y, Bresnahan P, Kim HJ, Nam S.  2014.  Dynamic variability of biogeochemical ratios in the Southern California Current System. Geophysical Research Letters. 41:2496-2501.   10.1002/2014gl059332   AbstractWebsite

We use autonomous nitrate (NO3-), oxygen (O-2), and dissolved inorganic carbon (DIC) observations to examine the relationship between ratios of C:N:O at an upwelling site in the Southern California Current System. Mean ratios and 95% confidence intervals observed by sensors over 8 months were NO3-:O-2=-0.110.002, NO3-:DIC=0.140.001, and DIC:O-2=-0.830.01, in good agreement with Redfield ratios. Variability in the ratios on the weekly time scale is attributable to shifts in biological demand and nutrient availability and shown to exhibit a spectrum of values ranging from near 100% New Production to 100% Regenerated Production.

Matson, PG, Martz TR, Hofmann GE.  2011.  High-frequency observations of pH under Antarctic sea ice in the southern Ross Sea. Antarctic Science. 23:607-613.   10.1017/s0954102011000551   AbstractWebsite

Although predictions suggest that ocean acidification will significantly impact polar oceans within 20-30 years, there is limited information regarding present-day pH dynamics of the Southern Ocean. Here, we present novel high-frequency observations of pH collected during spring of 2010 using SeaFET pH sensors at three locations under fast sea ice in the southern Ross Sea. During these deployments in McMurdo Sound, baseline pH ranged between 8.019-8.045, with low to moderate overall variation (0.043-0.114 units) on the scale of hours to days. The variation was predominantly in the direction of increased pH relative to baseline observations. Estimates of aragonite saturation state (Omega(Ar)) were > 1 with no observations of subsaturation. Time series records such as these are significant to the Antarctic science community; this information can be leveraged towards framing more environmentally relevant laboratory experiments aimed at assessing the vulnerability of Antarctic species to ocean acidification. In addition, increased spatial and temporal coverage of pH datasets may reveal ecologically significant patterns. Specifically, whether such variation in natural ocean pH dynamics may drive local adaptation to pH variation or provide refugia for populations of marine calcifiers in a future, acidifying ocean.

Matson, PG, Washburn L, Martz TR, Hofmann GE.  2014.  Abiotic versus biotic drivers of ocean pH variation under fast sea ice in McMurdo Sound, Antarctica. Plos One. 9   10.1371/journal.pone.0107239   AbstractWebsite

Ocean acidification is expected to have a major effect on the marine carbonate system over the next century, particularly in high latitude seas. Less appreciated is natural environmental variation within these systems, particularly in terms of pH, and how this natural variation may inform laboratory experiments. In this study, we deployed sensor-equipped moorings at 20 m depths at three locations in McMurdo Sound, comprising deep (bottom depth>200 m: Hut Point Peninsula) and shallow environments (bottom depth similar to 25 m: Cape Evans and New Harbor). Our sensors recorded high-frequency variation in pH (Hut Point and Cape Evans only), tide (Cape Evans and New Harbor), and water mass properties (temperature and salinity) during spring and early summer 2011. These collective observations showed that (1) pH differed spatially both in terms of mean pH (Cape Evans: 8.009 +/- 0.015; Hut Point: 8.020 +/- 0.007) and range of pH (Cape Evans: 0.090; Hut Point: 0.036), and (2) pH was not related to the mixing of two water masses, suggesting that the observed pH variation is likely not driven by this abiotic process. Given the large daily fluctuation in pH at Cape Evans, we developed a simple mechanistic model to explore the potential for biotic processes - in this case algal photosynthesis - to increase pH by fixing carbon from the water column. For this model, we incorporated published photosynthetic parameters for the three dominant algal functional groups found at Cape Evans (benthic fleshy red macroalgae, crustose coralline algae, and sea ice algal communities) to estimate oxygen produced/carbon fixed from the water column underneath fast sea ice and the resulting pH change. These results suggest that biotic processes may be a primary driver of pH variation observed under fast sea ice at Cape Evans and potentially at other shallow sites in McMurdo Sound.