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Burkett, AM, Rathburn AE, Perez ME, Levin LA, Martin JB.  2016.  Colonization of over a thousand Cibicidoides wuellerstorfi (foraminifera: Schwager, 1866) on artificial substrates in seep and adjacent off-seep locations in dysoxic, deep-sea environments. Deep-Sea Research Part I-Oceanographic Research Papers. 117:39-50.   10.1016/j.dsr.2016.08.011   AbstractWebsite

After-1 yr on the seafloor at water depths of similar to 700 m on Hydrate Ridge in the Pacific, eight colonization experiments composed primarily of a plastic mesh cube (from here on refered to as SEA(3), for Seafloor Epibenthic Attachment Cubes) were colonized by 1076 Cibicidoides wuellerstorfi on similar to 1841 cm(2) of experimental substrate. This species is typically considered an indicator of well-oxygenated conditions, and recruitment of such large numbers in bottom waters with low dissolved oxygen availability (0.24-0.37 mL/L) indicate that this taxon may not be as limited by oxygen as previously thought. Clues about substrate preferences were evident from the distribution, or lack thereof, of individuals among plastic mesh, coated steel frame, wooden dowels and reflective tape. Abundance, individual size distributions within cage populations and isotopic biogeochemistry of living foraminifera colonizing experimental substrates were compared between active seep and adjacent off seep experiment locations, revealing potential differences between these environments. Few studies have examined foraminiferal colonization of hard substrates in the deep-sea and to our knowledge no previous study has compared foraminiferal colonization of active seep and off-seep substrates from the same region. This study provides initial results of recruitment, colonization, geochemical and morphological aspects of the paleoceanographically significant species, C. wuellerstorfi, from dynamic deep-sea environments. Further experimental deployments of SEA(3)s will provide a means to assess relatively unknown ecologic dynamics of important foraminiferal deep-sea species.

Basak, C, Rathburn AE, Perez ME, Martin JB, Kluesner JW, Levin LA, De Deckker P, Gieskes JM, Abriani M.  2009.  Carbon and oxygen isotope geochemistry of live (stained) benthic foraminifera from the Aleutian Margin and the Southern Australian Margin. Marine Micropaleontology. 70:89-101.   10.1016/j.marmicro.2008.11.002   AbstractWebsite

Comparisons of ambient bottom-water geochemistry and stable isotopic values of the tests of living (stained) calcareous benthic foraminifera from the North Pacific (on the Aleutian Margin, water depth 1988 m) and Murray Canyons group in the Southern Indian Ocean (Australian Margin, water depths 2476 m and 1634 m) provide modem environmental analogs to calibrate paleoenvironmental assessments. Consistent with the hypothesis that microhabitat preferences influence foraminiferal isotopic values, benthic foraminifera from both margins were depleted in (13)C with respect to bottom-water dissolved inorganic carbon (DIC). The carbon isotope values of deep infaunal foraminifera (Chilostomella oolina, Globobulimina pacifica) showed greater differences from estimates of those of DIC than shallow benthic foraminifera (Bulimina mexicana, Bolivinita quadrilatera, Pullenia bulloides). This study provides new isotopic and ecological information for B. quadrilatera. The mean Delta delta(13)C value, defined as foraminiferal delta(13)C values minus estimated ambient delta(13)C values from the Aleutian Margin, is 0.97 parts per thousand higher for G. pacifica than the mean from the Murray Canyon. This difference may result either from genetic or biological differences between the populations or from differences in environmental isotopic influences (such as pore water differences) that were not accounted for in the equilibrium calculations. These analyses provide calibration information for the evaluation of bottom water conditions and circulation patterns of ancient oceans based on fossil foraminiferal geochemistry. (C) 2008 Elsevier B.V. All rights reserved.

Gooday, AJ, Levin LA, da Silva AA, Bett BJ, Cowie GL, Dissard D, Gage JD, Hughes DJ, Jeffreys R, Lamont PA, Larkin KE, Murty SJ, Schumacher S, Whitcraft C, Woulds C.  2009.  Faunal responses to oxygen gradients on the Pakistan margin: A comparison of foraminiferans, macrofauna and megafauna. Deep-Sea Research Part Ii-Topical Studies in Oceanography. 56:488-502.   10.1016/j.dsr2.2008.10.003   AbstractWebsite

The Pakistan Margin is characterised by a strong mid-water oxygen minimum zone (OMZ) that intercepts the seabed at bathyal depths (150-1300 m). We investigated whether faunal abundance and diversity trends were similar among protists (foraminiferans and gromiids), metazoan macrofauna and megafauna along a transect (140-1850 m water depth) across the OMZ during the 2003 intermonsoon (March-May) and late/post-monsoon (August-October) seasons. All groups exhibited some drop in abundance in the OMZ core (250-500 m water depth; O(2): 0.10-0.13 mL L(-1) = 4.46-5.80 mu M) but to differing degrees. Densities of foraminiferans >63 mu m were slightly depressed at 300 m, peaked at 738 m, and were much lower at deeper stations. Foraminiferans >300 mu m were the overwhelmingly dominant macrofaunal organisms in the OMZ core. Macrofaunal metazoans reached maximum densities at 140 m depth, with additional peaks at 850, 940 and 1850 m where foraminiferans were less abundant. The polychaete Linopherus sp. was responsible for a macrofaunal biomass peak at 950 m. Apart from large swimming animals (fish and natant decapods), metazoan megafauna were absent between 300 and 900 m (O(2) <0.14-0.15 mLL(-1) = 6.25-6.69 mu M) but were represented by a huge, ophiuroid-dominated abundance peak at 1000 m (O(2) similar to 0.15-0.18 mLL(-1) = 6.69-8.03 mu M). Gromiid protists were confined largely to depths below 1150 m (O(2) > 0.2 mLL(-1) = 8.92 mu M). The progressively deeper abundance peaks for foraminiferans (> 63 mu m), Linopherus sp. and ophiuroids probably represent lower OMZ boundary edge effects and suggest a link between body size and tolerance of hypoxia. Macro- and megafaunal organisms collected between 800 and 1100 m were dominated by a succession of different taxa, indicating that the lower part of the OMZ is also a region of rapid faunal change. Species diversity was depressed in all groups in the OMZ core, but this was much more pronounced for macrofauna and megafauna than for foraminiferans. Oxygen levels strongly influenced the taxonomic composition of all faunal groups. Calcareous foraminiferans dominated the seasonally and permanently hypoxic sites (136-300 m); agglutinated foraminiferans were relatively more abundant at deeper stations where oxygen concentrations were >0.13 mLL(-1)( = 5.80 mu M). Polychaetes were the main macrofaunal taxon within the OMZ; calcareous macrofauna, and megafauna (molluscs and echinoderms) were rare or absent where oxygen levels were lowest. The rarity of larger animals between 300 and 700 m on the Pakistan Margin, compared with the abundant macrofauna in the OMZ core off Oman, is the most notable contrast between the two sides of the Arabian Sea. This difference probably reflects the slightly higher oxygen levels and better food quality on the western side. (C) 2008 Published by Elsevier Ltd.

Woulds, C, Cowie GL, Levin LA, Andersson JH, Middelburg JJ, Vandewiele S, Lamont PA, Larkin KE, Gooday AJ, Schumacher S, Whitcraft C, Jeffreys RM, Schwartz M.  2007.  Oxygen as a control on seafloor biological communities and their roles in sedimentary carbon cycling. Limnology and Oceanography. 52:1698-1709.   10.4319/lo.2007.52.4.1698   AbstractWebsite

C-13 tracer experiments were conducted at sites spanning the steep oxygen, organic matter, and biological community gradients across the Arabian Sea oxygen minimum zone, in order to quantify the role that benthic fauna play in the short-term processing of organic matter (OM) and to determine how this varies among different environments. Metazoan macrofauna and macrofauna-sized foraminiferans took up as much as 56 +/- 13 mg of added C m(-2) (685 mg C m(-2) added) over 2-5 d, and at some sites this uptake was similar in magnitude to bacterial uptake and/or total respiration. Bottom-water dissolved oxygen concentrations exerted a strong control over metazoan macrofaunal OM processing. At oxygen concentrations > 7 mu mol L-1 (0.16 ml L-1), metazoan macrofauna were able to take advantage of abundant OM and to dominate OM uptake, while OM processing at O-2 concentrations of 5.0 mu mol L-1 (0.11 ml L-1) was dominated instead by (macrofaunal) foraminiferans. This led us to propose the hypothesis that oxygen controls the relative dominance of metazoan macrofauna and foraminifera in a threshold manner, with the threshold lying between 5 and 7 mu mol L-1 (0.11 to 0.16 ml L-1). Large metazoan macrofaunal biomass and high natural concentrations of OM were also associated with rapid processing of fresh OM by the benthic community. Where they were present, the polychaete Linopherus sp. and the calcareous foraminiferan Uvigerina ex gr. semiornata, dominated the uptake of OM above and below, respectively, the proposed threshold concentrations of bottom-water oxygen.

Robinson, CA, Bernhard JM, Levin LA, Mendoza GF, Blanks JK.  2004.  Surficial hydrocarbon seep infauna from the Blake Ridge (Atlantic Ocean, 2150 m) and the Gulf of Mexico (690-2240 m). Marine Ecology-Pubblicazioni Della Stazione Zoologica Di Napoli I. 25:313-336.   10.1111/j.1439-0485.2004.00034.x   AbstractWebsite

Infauna, including foraminifera and metazoans, were enumerated and identified from five types of seep habitats and two adjacent non-seep habitats. Collections were made with the deep submergence research vessel 'Alvin' from three areas of active seepage in the Gulf of Mexico (Alaminos Canyon [2220 m], Atwater Canyon [1930 m], and Green Canyon lease block 272 [700 m]) and on the Blake Ridge Diapir [2250 m], which is located off the southeastern coast of the United States. The seep habitats sampled included four types of microbial mats (Beggiatoa, Thioploca, thin and thick Arcobacter) and the periphery of a large mussel bed. Sediments under large rhizopod protists, xenophyophores, were sampled adjacent to the mussel bed periphery. A non-seep site, which was >1 km away from active seeps, was also sampled for comparison. Densities of most taxa were higher in the Gulf of Mexico seeps than in Blake Ridge samples, largely because densities in the thick microbial mats of Blake Ridge were significantly lower. Diversity was higher in the Thioploca mats compared to other microbial-mat types. Within an ocean basin (i.e., Atlantic, Gulf of Mexico) we did not observe significant differences in meiofaunal or macrofaunal composition in Beggiatoa versus Thioploca mats or thin versus thick Arcobacter mats. Foraminifera represented up to 16% of the seep community, a proportion that is comparable to their contribution at adjacent non-seep communities. In general, the observed densities and taxonomic composition of seep sites at the genus level was consistent with previous observations from seeps (e.g., the foraminifers Bolivina and Fursenkoina, the dorvilleid polychaete Ophryotrocha).

Levin, LA, Etter RJ, Rex MA, Gooday AJ, Smith CR, Pineda J, Stuart CT, Hessler RR, Pawson D.  2001.  Environmental influences on regional deep-sea species diversity. Annual Review of Ecology and Systematics. 32:51-93.   10.1146/annurev.ecolsys.32.081501.114002   AbstractWebsite

Most of our knowledge of biodiversity and its causes in the deep-sea benthos derives from regional-scale sampling studies of the macrofauna. Improved sampling methods and the expansion of investigations into a wide variety of habitats have revolutionized our understanding of the deep sea. Local species diversity shows clear geographic variation on spatial scales of 100-1000 km. Recent sampling programs have revealed unexpected complexity in community structure at the landscape level that is associated with large-scale oceanographic processes and their environmental consequences. We review the relationships between variation in local species diversity and the regional-scale phenomena of boundary constraints, gradients of productivity, sediment heterogeneity, oxygen availability, hydrodynamic regimes, and catastrophic physical disturbance. We present a conceptual model of how these interdependent environmental factors shape regional-scale variation in local diversity. Local communities in the deep sea may be composed of species that exist as metapopulations whose regional distribution depends on a balance among global-scale, landscape-scale, and small-scale dynamics. Environmental gradients may form geographic patterns of diversity by influencing local processes such as predation, resource partitioning, competitive exclusion, and facilitation that determine species coexistence. The measurement of deep-sea species diversity remains a vital issue in comparing geographic patterns and evaluating their potential causes. Recent assessments of diversity using species accumulation curves with randomly pooled samples confirm the often-disputed claim that the deep sea supports higher diversity than the continental shelf. However, more intensive quantitative sampling is required to fully characterize the diversity of deep-sea sediments, the most extensive habitat on Earth. Once considered to be constant, spatially uniform, and isolated, deep-sea sediments are now recognized as a dynamic, richly textured environment that is inextricably linked to the global biosphere. Regional studies of the last two decades provide the empirical background necessary to formulate and test specific hypotheses of causality by controlled sampling designs and experimental approaches.

Rathburn, AE, Levin LA, Held Z, Lohmann KC.  2000.  Benthic foraminifera associated with cold methane seeps on the northern California margin: Ecology and stable isotopic composition. Marine Micropaleontology. 38:247-266.   10.1016/s0377-8398(00)00005-0   AbstractWebsite

Release of methane from large marine reservoirs has been linked to climate change, as a causal mechanism and a consequence of temperature changes, during the Quaternary and the Paleocene. These inferred linkages are based primarily on variations in benthic foraminiferal stable isotope signatures. Few modem analog data exist, however, to assess the influence of methane flux on the geochemistry or faunal characteristics of benthic foraminiferal assemblages. Here we present analyses of the ecology and stable isotopic compositions of living (Rose Bengal stained) and dead (fossil) foraminifera (>150 mu m) from cold methane seeps on the slope off of the Eel River, northern California (500-525 m), and discuss potential applications for reconstructions of methane release in the past and present. Calcareous foraminiferal assemblages associated with Calyptogena clam bed seeps were comprised of species that are also found in organic-rich environments. Cosmopolitan, paleoceanographically important taxa were abundant; these included Uvigerina, Bolivina, Chilostomella, Globobulimina, and Nonionella. We speculate that seep foraminifera are attracted to the availability of food at cold seeps, and require no adaptations beyond those needed for life in organic-rich, reducing environments. Oxygen isotopic values of the tests of living foraminiferal assemblages from seeps had a high range (up to 0.69 parts per thousand) as did carbon isotopic values (up to 1.02 parts per thousand). Many living foraminiferal isotope values were within the range exhibited by the same or similar species in non-seep environments. Carbon isotopic values of fossil foraminifera found deeper in the sediments (18-20 cm), however, were 4.10 parts per thousand (U. peregrina) and 3.60 parts per thousand (B. subargentea) more negative than living delta(13)C values. These results suggest that delta(13)C values of foraminiferal tests reflect methane seepage and species-specific differences in isotopic composition, and can indicate temporal variations in seep activity. A better understanding of foraminiferal ecology and stable isotopic composition will enhance paleo-seep recognition, and improve interpretations of climatic and paleoceanographic change. (C) 2000 Elsevier Science B.V. All rights reserved.

Gooday, AJ, Bernhard JM, Levin LA, Suhr SB.  2000.  Foraminifera in the Arabian Sea oxygen minimum zone and other oxygen-deficient settings: taxonomic composition, diversity, and relation to metazoan faunas. Deep-Sea Research Part Ii-Topical Studies in Oceanography. 47:25-54.   10.1016/s0967-0645(99)00099-5   AbstractWebsite

Previous work has shown that some foraminiferal species thrive in organically enriched, oxygen-depleted environments. Here, we compare 'live' (stained) faunas in multicorer samples (0-1 cm layer) obtained at two sites on the Oman margin, one located at 412m within the oxygen minimum zone (OMZ) (O(2) = 0.13 ml l(-1)), the other located at 3350 m, well below the main OMZ (O(2) similar to 3.00 ml l(-1)). While earlier studies have focused on the hard-shelled (predominantly calcareous) foraminifera, we consider complete stained assemblages, including poorly known, soft-shelled, monothalamous forms. Densities at the 412-m site were much higher (16,107 individuals.10 cm(-2) in the > 63-mu m fraction) than at the 3350-m site (625 indiv.10 cm(-2)). Species richness (E(S(100))), diversity (H', Fishers Alpha index) and evenness (J') were much lower, and dominance (R1D) was higher, at 412 m compared with 3350 m. At 412 m, small calcareous foraminifera predominated and soft-shelled allogromiids and sacamminids were a minor faunal element. At 3350 m, calcareous individuals were much less common and allogromiids and saccamminids formed a substantial component of the fauna. There were also strong contrasts between the foraminiferal macrofauna( > 300-mu m fraction) at these two sites; relatively small species of Bathysiphon, Globobulimina and Lagenammina dominated at 412 m, very large, tubular, agglutinated species of Bathysiphon, Hyperammina, Rhabdammina and Saccorhiza were important at 3350 m. Our observations suggest that, because they contain fewer soft-shelled and agglutinated foraminifera, a smaller proportion of bathyal, low-oxygen faunas is lost during fossilization compared to faunas from well-oxygenated environments. Trends among foraminifera (> 63 mu m fraction) in the Santa Barbara Basin (590 and 610m depth; O(2) = 0.05 and 0.15 ml(-1) respectively), and macrofaunal foraminifera(> 300 mu m) on the Peru margin (300-1250 m depth: O(2) = 0.02-1.60 mi l(-1)), matched those observed on the Oman margin. Tn particular, soft-shelled monothalamous taxa were rare and large agglutinated taxa were absent in the most oxygen-depleted ( < 0.20 mi l(-1)) stations. Foraminifera often outnumber metazoans (both meiofaunal and macrofaunal) in bathyal oxygen-depleted settings. However, although phylogenetically distant, foraminifera and metazoans exhibit similar population responses to oxygen depletion; species diversity decreases, dominance increases, and the relative abundance of the major taxa changes. The foraminiferal macrofauna ( > 300 mu m) were 5 times more abundant than the metazoan macrofauna at 412 m on the Oman margin but 16 times more abundant at the 3350 m site. Among the meiofauna (63-300 mu m), the trend was reversed, foraminifera were 17 times more abundant than metazoan taxa at 412 m but only 1.4 times more abundant at 3350 In. An abundance of food combined with oxygen levels which are not depressed sufficiently to eliminate the more tolerant taxa, probably explains why foraminifera and macrofaunal metazoans flourished at the 412-m site, perhaps to the detriment of the metazoan meiofauna. (C) 1999 Elsevier Science Ltd. All rights reserved.

Gooday, AJ, Levin LA, Thomas CL, Hecker B.  1992.  The distribution and ecology of Bathysiphon filiformis sars and B. major de folin (Protista, Foraminiferida) on the continental slope off North Carolina. Journal of Foraminiferal Research. 22:129-146. AbstractWebsite

Two large species of the agglutinated foraminifera genus Bathysiphon are common in samples and photographs from bathyal depths on the North Carolina continental slope: B. filiformis off Cape Hatteras (588-930 m bathymetric depth) and B. major off Cape Lookout (850-1950 m depth). The sampling area, and particularly the 850 m station where B. filiformis is abundant (mean densities of 59-154 per m2), is believed to receive large inputs of organic material from various sources. This is consistent with the previously observed occurrence of large Bathysiphon species in regions of high food supply. Ten camera sled transects across the eastern U.S. continental slope between 32-degrees-N and 41-degrees-N emphasize the abundance of B. filiformis in the Cape Hatteras area compared with its rarity or absence elsewhere along the continental slope. Box cores, bottom photographs, and direct submersible observations indicate that B. filiformis tubes project above the sediment in an arcuate curve with only the lower 1 cm or so buried. Bathysiphon major adopts a similar orientation but has a greater proportion (50-80%) of the tube buried. The voluminous, dense, granular protoplasm of both species contains biogenic particles (including diatoms, in B. filiformis only), dinoflagellate cysts, fungal remains, pollen grains, tintinnid loricae, polychaete jaws and setae, benthic foraminiferal tests, and fish tooth fragments), suggesting that they feed mainly on material derived from the sediment surface. Submersible observations indicate that B. filiformis is patchily distributed at 100 m scales. Smaller scale dispersion patterns (analyzed from photographs) are generally random but with a tendency to be aggregated at lower densities and uniform at higher densities. A variety of metazoans and foraminifers live epifaunally on the outer surfaces of B. filiformis tubes. The most frequently occurring metazoans were larvae and juveniles of an unidentified gastropod and a tubiculous terebellid polychaete Nicolea sp. The most common epifaunal foraminifers were Tritaxis conica and Trochammina sp. Tubes of B. major, however, are virtually devoid of epifauna. Our results support the view that large, agglutinated rhizopod tests may influence the structure of deep-water benthic communities. However, in the case of Bathysiphon on the North Carolina continental slope, the effect appears limited to taxa directly associated with the foraminiferal tubes.